Step 1: The key clue is emphysema (irreversible enlargement of airspaces distal to the terminal bronchiole) in a young, non-smoking, non-alcoholic woman. Emphysema without a smoking history demands a hereditary cause.
Step 2: The autopsy shows panacinar emphysema, the pattern typical of alpha-1 antitrypsin deficiency. Alpha-1 antitrypsin normally inhibits neutrophil proteases (mainly elastase). When it is deficient, unopposed elastase destroys alveolar elastic tissue, producing early panacinar emphysema, classically basal-predominant.
Step 3: The distractors do not fit a pure emphysema picture in a non-smoker: dynein arm mutation causes primary ciliary dyskinesia (bronchiectasis, situs inversus), cystic fibrosis causes thick-mucus bronchiectasis, and anti-type-IV-collagen antibodies cause Goodpasture (a pulmonary-renal hemorrhage syndrome). The matching cause is alpha-1 antitrypsin deficiency.
Ref: Robbins Basic Pathology.